Presentations at the annual meetings of Societies in Japan

1. Miyazawa, Sanzo:
   Boltzmann Machine Learning and Regularization Methods for Inferring Evolutionary Fields and Couplings from a Multiple Sequence Alignment
   Poster (P-04) presented at at IIBMP2021, the annual meeting of the Japanese Society for Bioinformatics, in September 27--29, 2021
   Abstract | Poster


2. Miyazawa, Sanzo:
   Selection originating from protein stability/foldability: Relationships between protein folding free energy, sequence ensemble and fitness
   Poster (#20431P) presented at the 58th annual meeting of the Biophysical Society of Japan in 2020-09-16 to 2020-09-18
   Abstract | Poster


3. Miyazawa, Sanzo:
   Selection maintaining protein stability at equilibrium (蛋白質構造安定性の維持に起因する淘汰)
   Poster presented at the BS2016 (The 54th annual meeting of the Biophysical Society of Japan in 2016-11-25 to 2016-11-27),
   Poster #2Pos276, 2016/11/25-27, Tukuba, Japan.
   Seibutsu Butsuri, 56, Supplement 1-2, S273, 2016.
   Abstract | Poster


4. Miyazawa, Sanzo:
   Prediction of contact residue pairs based on concurrent and compensatory substitutions between sites in protein evolution.
   Poster and Oral presented at the JSBi2013 (the Japanese Bioinformatics Society in 2013),
   Abstracts #52 and Oral, 2013/10/29 - 31, Tokyo, Japan.
   Abstract | Talk | Poster


5. Miyazawa, Sanzo: Memorial meeting for Akinori Sarai
   JSBi2013 (the Japanese Bioinformatics Society in 2013), 2013/10/31, Tokyo, Japan.
   Memorial for Sarai


6. Miyazawa, Sanzo:
   Prediction of contact residue pairs based on concurrent and compensatory substitutions between sites in protein evolution.
   Poster presented at the 50th annual meeting of the Biophysical Society of Japan in 2012,
   Abstracts p. S120, 2PT007, 2012/09/22 - 24, Nagoya, Japan.
   Abstract | Poster


7. Miyazawa, Sanzo:
   Advantages of a mechanistic codon substitution model for evolutionary analysis of protein-coding sequences.
   Poster presented at the 14th annual meeting of the Society of Evolutionary Study, Japan in 2012,
   Abstracts p. 103, P-41, 2012-08-23 - 24, Tokyo, Japan.
   Abstract (text | pdf) | Poster


8. Miyazawa, Sanzo:
   Selective constraints on amino acids estimated by a mechanistic codon substitution model with multiple nucleotide changes.
   Poster presented at the 13th annual meeting of the Society of Evolutionary Study, Japan in 2011,
   Abstracts p. 74, P006, 2011-07-29 - 31, Kyoto, Japan.
   Abstract (text | pdf) | Poster


9. Miyazawa, Sanzo:
   Selective constraints on amino acids estimated by a mechanistic codon substitution model with multiple nucleotide changes.
   Poster presented at the annual meeting of the Biophysical Sociey of Japan in 2010,
   Abstracts p. S199, 3P-306, 2010-09-20 - 22, Sendai, Japan.
   Abstract | Poster


10. Miyazawa, Sanzo:
    A Codon-based model for evolution of protein-coding DNA sequences.
    Poster presented at the annual meeting of the Biophysical Sociey of Japan in 2008,
    Abstracts p. S174, 3P-301, 2008-12-03 - 05, Fukuoka, Japan.
    Abstract | Poster


11. Miyazawa, Sanzo and Jernigan, Robert L.:
    How effective for fold recognition is a potential of mean force that includes relative orientations between contacting residues in proteins?
    Poster presented at the annual meeting in 2005 of the Chem-Bio Informatics Socienty,
    Abstracts p. 75, #P40, 2005-08-24 - 26, Tsurumi, Japan.
    Abstract | Poster


12. Miyazawa, Sanzo:
    How effective for fold recognition is a potential of mean force that includes relative orientations between contacting residues in proteins?
    Poster presented at the 42th annual meeting in 2004 of the Biophysical Society of Japan,
    Abstracts p. S118, #2P035, 2004-12-14, Kyoto, Japan.
    Abstract | Poster


13. Miyazawa, Sanzo:
    Long- and short-range interactions in native protein structures are consistent/minimally-frustrated in sequence space.
    Poster presented at the 3rd annual meeting of the Protein Science Society of Japan,
    Abstracts p. 132, #3P-112, 2003-06-25, Sapporo, Japan.
    Abstract | Poster


14. Miyazawa, Sanzo:
    Long- and short-range interactions in native protein structures are consistent/minimally-frustrated in sequence space.
    Talk presented at the 2002 annual meeting of the Biophysical Socienty of Japan,
    Abstracts p. S53, #1J0915, 2002-11-02, Nagoya, Japan.
    Abstract | pdf for display | pdf for printing


15. Tokunaga, M, Uebayashi, M., Miyazawa, S., Nakano, T., and Kaminuma T.
    (徳永雅彦, 上林正巳, 宮澤三造, 中野達也, 神沼二眞):
    Development of the CBI portal (CBIポータルの構築).
    Poster presented at the annual meeting in 2000 of the Chem Bio Informatics Socienty (情報計算化学生物学会),
    Abstracts 6-1, 2000-07-26 - 28, Tokyo, Japan.
    Abstract


16. Miyazawa, Sanzo:
    Self-consistent estimation of inter-residue protein contact energies based on an equilibrium mixture approximation of residues.
    Talk presented at the 36th annual meeting of the Biophysical Socienty of Japan,
    Biophysics (in Japanese), Vol. 38 Sup. 2, p. S154, #3B1430, 1998-10-04, Fukuoka, Japan.
    Abstract (scanned image) | Abstract (Draft)


17. Miyazawa, Sanzo:
    Protein fold and sequence recognition by alignments.
    Poster presented at the 35th annual meeting of the Biophysical Socienty of Japan,
    Biophysics (Japanese), Vol. 37 Sup. 2, p. S171, #3P38, 1997-10-12, Kyoto, Japan.
    Abstract (scanned image)


18. Miyazawa, Sanzo:
    Residue-residue potentials with a favorable contact pair term and an unfavorable high density term for simulation and threading.
    Poster presented at the 34th annual meeting of the Biophysical Socienty of Japan,
    Biophysics (Japanese), Vol. 36 Sup., p. S86, #2020, 1996-11-08, Tsukuba, Japan.
    Abstract (scanned image)


19. Miyazawa, Sanzo:
    A reliable sequence alignment method based on probabilities of residue correspondences.
    Poster presented at the 33rd annual meeting of the Biophysical Socienty of Japan,
    Biophysics (Japanese), Vol. 35 Sup., p. S105, #2A29, 1995-09-24, Sapporo, Japan.
    Abstract (scanned image)


20. Miyazawa, Sanzo:
    Protein stability for single substitution mutants and local compactness in the denatured state
    Poster presented at the annual meeting of the Protein Engineering Society of Japan,
    Abstract p. 80, #P56, 1993-05-10, Kyoto, Japan.
    Abstract (scanned image)


21. Miyazawa, Sanzo and Hayashida, Hidenori:
    日本におけるDNAデータバンクの現状について.
    遺伝学会,
    1987.
    


22. Miyazawa, Sanzo:
    Statistical mechanics of supercoiling-induced B-to-Z transitions in a closed circular DNA: one-dimensional model system with a double quadratic displacement potential and long range interactions.
    Talk at The 24th annual meeting of the Biophysical society of Japan,
    Biophysics (Japanese), Vol. 26 Sup., p. S186, #2E1645, 1986-10-22, Tsukuba, Japan.
    Abstract (scanned image)


23. 郷 通子, 宮澤 三造:
    蛋白質の立体構造からみた分子進化におけるアミノ酸置換.
    蛋白質構造討論会,
    Oct. 1977.
    


24. 郷 通子, 水野 裕重, 宮澤 三造:
    ヘモグロビンの表面, 内部, サブユニット間接触面における アミノ酸置換速度.
    日本生物物理学会, 予稿集 p. 219,
    Sep. 30, 1977.
    


25. 郷 通子, 宮澤 三造, 松田 博嗣:
    蛋白質のpacking densityと相同蛋白質におけるアミノ酸置換.
    日本生物物理学会, 予稿集 p. 392, 14-F-4,
    Oct. 14, 1976.
    


26. 宮澤 三造, 郷 通子:
    相同蛋白質におけるcovarion.
    日本生物物理学会, 予稿集 p. 391, 14-F-3,
    Oct. 14, 1976.
    


27. 安永 照雄, 宮田 隆, 宮澤 三造:
    アミノ酸置換と遺伝コード.
    日本生物物理学会, 予稿集 p. 390, 14-F-2,
    Oct. 14, 1976.
    


28. 宮澤 三造, 郷 通子:
    蛋白質の内側と外側におけるアミノ酸置換の相違.
    生命の起源および進化学会, 予稿集 p. 99, C-4,
    Mar. 18, 1976.
    


29. 宮澤 三造, 宮田 隆:
    遺伝コードとアミノ酸置換.
    生命の起源および進化学会, 予稿集 p. 96, C-1,
    Mar. 18, 1976.
    


30. 宮澤 三造, 郷 通子, 宮田 隆:
    分子進化におけるアミノ酸置換と蛋白質の立体構造 IV.
    日本生物物理学会, 予稿集 p. 46, 29B-12,
    Oct. 29, 1975.
    


31. 宮澤 三造, 郷 通子, 松田 博嗣:
    分子進化におけるアミノ酸置換と蛋白質の立体構造 II.
    日本生物物理学会, 予稿集 p. 116,
    Sep. 29, 1974.
    


32. 郷 通子, 宮澤 三造:
    分子進化におけるアミノ酸置換と蛋白質の立体構造 I.
    日本生物物理学会, 予稿集 p. 115,
    Sep. 29, 1974.
    


33. 宮澤 三造, 石井 一成, 宮田 隆, 松田 博嗣:
    DNA, 蛋白質の種間差異のモデル的解釈 II.
    日本生物物理学会, 予稿集 p. 176,
    Oct. 7, 1973.