#norelated

* [[MIYAZAWA, Sanzo>MiyazawaWiki:Profile]] [[ >Miyazawa:profile]] ([[sanzo.miyazawa@gmail.com>mailto:sanzo.miyazawa@gmail.com]] | [[miyazawa@sanzo.org>mailto:miyazawa@sanzo.org]])[#qb249ac2]
- [[My profile in Google Scholar >http://scholar.google.co.jp/citations?user=6TZe1KgAAAAJ&hl=en]] ([[sanzo.miyazawa@gmail.com>mailto:sanzo.miyazawa@gmail.com]])

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** Web service [#w4087a67]
//(Inquiry: [[sanzo.miyazawa@gmail.com>mailto:sanzo.miyazawa@gmail.com]]) [#u922d7e2]

- Multiple sequence alignment
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[[ClustalW2>http://www.clustal.org/]]: [[A version modified to analyze coding sequences >Miyazawa:pub/clustalw2/index.html]]
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- ML method to infer a phylogenetic tree
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[[Phyml>http://code.google.com/p/phyml/]]:  [[A version modified to analyze coding sequences >Miyazawa:pub/phyml/index.php]]

-- Download: [[Patch file to the phyml package including data files>Miyazawa:pub/Download/phyml_patches/]] | [[Phyml web service>Miyazawa:pub/Download/phyml_webservice]]
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--References for [[the original PHYML>http://code.google.com/p/phyml/]] by S. Guindon AND O. Gascuel:
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Systematic Biology 52(5):696-704, 2003.
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--References for the modified version:
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[[PLoS One 8, e54252/pp. 1-20, 2013>http://dx.doi.org/10.1371/journal.pone.0054252]]
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[[PLoS One 8, e28892/pp. 1-20, 2011>http://dx.doi.org/10.1371/journal.pone.0028892]]
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[[PLoS One 8, e17244/pp. 1-23, 2011>http://dx.doi.org/10.1371/journal.pone.0017244]]
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- [[SQL search on PDB>Miyazawa:pub/pdbj/index_e.html]]
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